Content
- Getting started with NCGAS resources
- Galaxy training materials
- NCGAS pipelines
- Workshop/Tutorials
- Jetstream information
- Software installation materials
Getting Started
Below are a few links to help get started with some of the resources that are offered through NCGAS
- Welcome Basket for new users
- Getting started on our new system, Carbonate
- Getting Started on PSC Bridges
- Getting Started on Jetstream
- Getting Started on Globus
Galaxy Training
- Galaxy Deployment on Heterogenous Hardware
- Galaxy for Data Provenance
- Intro to Using Galaxy for Bioinformatics
- Moving data to Galaxy
- Moving Large Data to Galaxy
- RNA-Seq Demo on Galaxy
Other NCGAS Services
- Transcriptome Pipeline Documentation
- Pop Up Genome Browser Virtual Machine Documentation
- Intro to Cancer Transcriptome Analysis Toolkit Using Trinity
- Genomics, Transcriptomics, and Proteomics: Engaging Biologists
- Intro to Bioinformatics - Assembling a Transcriptome
- Careers in Computing and Science
Workshops/Tutorials
Jetstream Information
- Getting Started on Jetstream
- Setting up SSH keys
- Setting up Globus on Jetstream
- Setting up Volumes on Jetstream
- Adding users to Jetstream image
- Using Ansible to manage Jetstream images
- Running Anvio on Jetstream
- Jetstream to teach courses/workshops