Service change notice. NCGAS ending operation December 31, 2021. Read about service changes here.
NCGAS Training Materials
NCGAS has been an exceptional partner in promoting and supporting Jetstream use by users in biological sciences. The recent workshop ‘R for Biologists’ that turned virtual is a great example of how collaboration can have a greater impact on the community.
David Y. Hancock, Director of Advanced Cyberinfrastructure
Getting Started
Below are a few links to help get started with some of the resources that are offered through NCGAS
- Welcome Basket for new users
- Getting started on our new system, Carbonate
- Getting Started on PSC Bridges
- Getting Started on Jetstream
- Getting Started on Globus
Galaxy Training
- Galaxy Deployment on Heterogenous Hardware
- Galaxy for Data Provenance
- Intro to Using Galaxy for Bioinformatics
- Moving data to Galaxy
- Moving Large Data to Galaxy
- RNA-Seq Demo on Galaxy
Other NCGAS Services
- Transcriptome Pipeline Documentation
- Pop Up Genome Browser Virtual Machine Documentation
- Intro to Cancer Transcriptome Analysis Toolkit Using Trinity
- Genomics, Transcriptomics, and Proteomics: Engaging Biologists
- Intro to Bioinformatics - Assembling a Transcriptome
- Careers in Computing and Science
Workshops/Tutorials
Jetstream Information
- Getting Started on Jetstream
- Setting up SSH keys
- Setting up Globus on Jetstream
- Setting up Volumes on Jetstream
- Adding users to Jetstream image
- Using Ansible to manage Jetstream images
- Running Anvio on Jetstream
- Jetstream to teach courses/workshops