Key services
Highlights
NCGAS de novo Transcriptome Assembly Workshop Highlight
New Pop Up Genome Browser Virtual Machine
Working with biological field stations to improve access to environmental data
IU's Jetstream focus of HPC workshop at University of Arkansas
Meeting Cenicafe at PAG 2017 to discuss Coffee Genomics
Support / Resources
- Knowledge Base: Search the UITS Knowledge Base
- Training Materials: contact Training Materials
- Contact Form: contact Contact NCGAS
- Request Allocation: contact Request Allocation
- Annual Reports and Surveys: contactAnnual Reports and Surveys
- Publications:contactPublications
- Search NCGAS:
NSF Awards DBI-1062432 2011,
ABI-1458641 2015,
ABI-1759906 2018
Collaborator ABI-1458689 2015,
ABI-1759914 2018
NCGAS Partners
NCGAS Home
National Center for Genome Analysis Support (NCGAS) is a collaborative project between the lead institution, Indiana University (IU), and the Pittsburgh Supercomputing Center (PSC) at Carnegie Mellon University.
The mission of NCGAS is to enable the biological research community of the US to analyze, understand, and make use of the vast amount of genomic information now available. NCGAS focuses particularly on transcriptome- and genome-level assembly, phylogenetics, metagenomics, transcriptomics, and community genomics. Click here to read more.
NCGAS Resources
- Welcome basket for new users
- Transcriptome Pipeline Welcome Basket
- Training materials- Galaxy services, Jetstream materials
- Blog
- NCGAS workshops
- Contact NCGAS
NCGAS de novo Transcriptome Assembly Spring Workshop Highlights
In late April, the NCGAS gave its first national-level workshop in bioinformatics, focusing on de novo transcriptome assembly and DE analysis. Back by popular demand, NCGAS is hosting another workshop in the Fall (October 2018).
The workshop was highlighted in
New Pop Up Genome Browser Virtual Machine Available
Now on Jetstream, a ready to use
Read more and see a Demo Site...
NCGAS Coffee Collaboration Highlighted in ScienceNode
Read about all the cool things we're doing for science's favorite drink!
New assembly tutorials
NCGAS now has tutorials on
NCGAS presented ten times at PAG, and featured two more times by collaborators!
IU's Mason gets a replacement
Mason, Indiana University's large memory computer cluster, will be retired on January 1, 2018. The
Working with biological field stations to improve access to environmental data
NCGAS (National Center for Genome Analysis Support) attended the 2017 Organization of Biological Field Stations (OBFS) meeting to improve access to valuable ecological data.
IU's Jetstream focus of HPC workshop at University of Arkansas
Jeff Pummill, director of strategic initiatives and user services for the Arkansas
IU projects shine at 2017 Plant and Animal Genome Conference
Jetstream and NCGAS coordinate,
Trinity and NCGAS partnership thrives as software popularity continues to grow
The Broad Institute’s messenger RNA (mRNA) assembler, Trinity (developed by Aviv Regev, Brian Haas
NCGAS provides HPC, training, and networking to Bethune-Cookman University students
In a recent collaboration, NCGAS provides HPC, training, and networking to Bethune-Cookman University students
See more in Archived News